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» The Personal Sequence Database: a suite of tools to create a...
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NAR
2008
97views more  NAR 2008»
13 years 5 months ago
Database resources of the National Center for Biotechnology Information
In addition to maintaining the GenBank(R) nucleic acid sequence database, the National Center for Biotechnology Information (NCBI) provides analysis and retrieval resources for th...
David L. Wheeler, Tanya Barrett, Dennis A. Benson,...
BMCBI
2010
121views more  BMCBI 2010»
13 years 3 months ago
A grammar-based distance metric enables fast and accurate clustering of large sets of 16S sequences
Background: We propose a sequence clustering algorithm and compare the partition quality and execution time of the proposed algorithm with those of a popular existing algorithm. T...
David J. Russell, Samuel F. Way, Andrew K. Benson,...
CIKM
2008
Springer
13 years 7 months ago
SNIF TOOL: sniffing for patterns in continuous streams
Continuous time-series sequence matching, specifically, matching a numeric live stream against a set of predefined pattern sequences, is critical for domains ranging from fire spr...
Abhishek Mukherji, Elke A. Rundensteiner, David C....
BMCBI
2010
135views more  BMCBI 2010»
13 years 5 months ago
Integration and visualization of systems biology data in context of the genome
Background: High-density tiling arrays and new sequencing technologies are generating rapidly increasing volumes of transcriptome and protein-DNA interaction data. Visualization a...
J. Christopher Bare, Tie Koide, David J. Reiss, Da...
RAID
1999
Springer
13 years 10 months ago
Session State Transition Based Large Network IDS
In order to present large-scale malicious attacks on an ISP network to maintain network services, we have designed a method to record key packets classified by sessions. Session i...
Qianli Zhang, Xing Li