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BMCBI
2011
12 years 8 months ago
The Proteogenomic Mapping Tool
Background: High-throughput mass spectrometry (MS) proteomics data is increasingly being used to complement traditional structural genome annotation methods. To keep pace with the...
William S. Sanders, Nan Wang, Susan M. Bridges, Br...
BMCBI
2008
214views more  BMCBI 2008»
13 years 4 months ago
Accelerating String Set Matching in FPGA Hardware for Bioinformatics Research
Background: This paper describes techniques for accelerating the performance of the string set matching problem with particular emphasis on applications in computational proteomic...
Yoginder S. Dandass, Shane C. Burgess, Mark Lawren...
SEMWEB
2005
Springer
13 years 9 months ago
OMEN: A Probabilistic Ontology Mapping Tool
Abstract. Most existing ontology mapping tools do not provide exact mappings. Rather, there is usually some degree of uncertainty. We describe a framework to improve existing ontol...
Prasenjit Mitra, Natasha F. Noy, Anuj R. Jaiswal
CSCWD
2009
Springer
13 years 11 months ago
ETM Toolkit: A development tool based on Extended Topic Map
By research on Topic Map standard, the Extended Topic Map (ETM) is proposed as a novel model for better organization and management of the massive knowledge resources in E-learnin...
Lu Jiang, Jun Liu, Zhaohui Wu, Qinghua Zheng, Ya-n...
SCAM
2006
IEEE
13 years 10 months ago
Linking Analysis and Transformation Tools with Source-Based Mappings
This paper discusses an approach to linking separate analysis and transformation tools, such that analysis results can be used to guide transformations. Our approach consists of t...
Magiel Bruntink