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BMCBI
2002
126views more  BMCBI 2002»
13 years 5 months ago
RIO: Analyzing proteomes by automated phylogenomics using resampled inference of orthologs
Background: When analyzing protein sequences using sequence similarity searches, orthologous sequences (that diverged by speciation) are more reliable predictors of a new protein&...
Christian M. Zmasek, Sean R. Eddy
BMCBI
2011
12 years 9 months ago
PRIN, a predicted rice interactome network
Background: Protein-protein interactions play a fundamental role in elucidating the molecular mechanisms of biomolecular function, signal transductions and metabolic pathways of l...
Haibin Gu, Pengcheng Zhu, Yinming Jiao, Yijun Meng...
WWW
2009
ACM
14 years 6 months ago
Matchbox: large scale online bayesian recommendations
We present a probabilistic model for generating personalised recommendations of items to users of a web service. The Matchbox system makes use of content information in the form o...
David H. Stern, Ralf Herbrich, Thore Graepel
P2P
2006
IEEE
229views Communications» more  P2P 2006»
13 years 11 months ago
Cost-Aware Processing of Similarity Queries in Structured Overlays
Large-scale distributed data management with P2P systems requires the existence of similarity operators for queries as we cannot assume that all users will agree on exactly the sa...
Marcel Karnstedt, Kai-Uwe Sattler, Manfred Hauswir...
BMCBI
2010
112views more  BMCBI 2010»
13 years 5 months ago
In silico fragmentation for computer assisted identification of metabolite mass spectra
Background: Mass spectrometry has become the analytical method of choice in metabolomics research. The identification of unknown compounds is the main bottleneck. In addition to t...
Sebastian Wolf, Stephan Schmidt, Matthias Mül...