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JAIR
2008
94views more  JAIR 2008»
13 years 4 months ago
The Ultrametric Constraint and its Application to Phylogenetics
A phylogenetic tree shows the evolutionary relationships among species. Internal nodes of the tree represent speciation events and leaf nodes correspond to species. A goal of phyl...
Neil C. A. Moore, Patrick Prosser
CONSTRAINTS
2008
90views more  CONSTRAINTS 2008»
13 years 4 months ago
Combining Tree Partitioning, Precedence, and Incomparability Constraints
The tree constraint partitions a directed graph into node-disjoint trees. In many practical applications that involve such a partition, there exist side constraints specifying requ...
Nicolas Beldiceanu, Pierre Flener, Xavier Lorca
BMCBI
2005
137views more  BMCBI 2005»
13 years 4 months ago
A configuration space of homologous proteins conserving mutual information and allowing a phylogeny inference based on pair-wise
Background: Popular methods to reconstruct molecular phylogenies are based on multiple sequence alignments, in which addition or removal of data may change the resulting tree topo...
Olivier Bastien, Philippe Ortet, Sylvaine Roy, Eri...