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» The repeatability experiment of SIGMOD 2008
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COMAD
2008
13 years 6 months ago
REBMEC: Repeat Based Maximum Entropy Classifier for Biological Sequences
An important problem in biological data analysis is to predict the family of a newly discovered sequence like a protein or DNA sequence, using the collection of available sequence...
Pratibha Rani, Vikram Pudi
SIGMOD
2008
ACM
138views Database» more  SIGMOD 2008»
13 years 5 months ago
Configuration-parametric query optimization for physical design tuning
Automated physical design tuning for database systems has recently become an active area of research and development. Existing tuning tools explore the space of feasible solutions...
Nicolas Bruno, Rimma V. Nehme
USS
2008
13 years 7 months ago
Experiment Isolation in a Secure Cluster Testbed
A major class of network emulation testbeds is based on the Utah Emulab design: a local cluster of experimental nodes interconnected through Ethernet switches using VLANs. The VLA...
Kevin Lahey, Robert Braden, Keith Sklower
GECCO
2008
Springer
155views Optimization» more  GECCO 2008»
13 years 6 months ago
Experiments with indexed FOR-loops in genetic programming
We investigated how indexed FOR-loops, such as the ones found in procedural programming languages, can be implemented in genetic programming. We use them to train programs that le...
Gayan Wijesinghe, Victor Ciesielski
BMCBI
2008
115views more  BMCBI 2008»
13 years 5 months ago
Probe signal correction for differential methylation hybridization experiments
Background: Non-biological signal (or noise) has been the bane of microarray analysis. Hybridization effects related to probe-sequence composition and DNA dye-probe interactions h...
Dustin P. Potter, Pearlly Yan, Tim Hui-Ming Huang,...