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BMCBI
2011
12 years 9 months ago
Wavelet-based identification of DNA focal genomic aberrations from single nucleotide polymorphism arrays
Background: Copy number aberrations (CNAs) are an important molecular signature in cancer initiation, development, and progression. However, these aberrations span a wide range of...
Youngmi Hur, Hyunju Lee
BMCBI
2010
103views more  BMCBI 2010»
13 years 5 months ago
Nonparametric methods for the analysis of single-color pathogen microarrays
Background: The analysis of oligonucleotide microarray data in pathogen surveillance and discovery is a challenging task. Target template concentration, nucleic acid integrity, an...
Omar J. Jabado, Sean Conlan, P. Lan Quan, Jeffrey ...
BMCBI
2007
156views more  BMCBI 2007»
13 years 5 months ago
Large-scale clustering of CAGE tag expression data
Background: Recent analyses have suggested that many genes possess multiple transcription start sites (TSSs) that are differentially utilized in different tissues and cell lines. ...
Kazuro Shimokawa, Yuko Okamura-Oho, Takio Kurita, ...
DATAMINE
2008
137views more  DATAMINE 2008»
13 years 5 months ago
Two heads better than one: pattern discovery in time-evolving multi-aspect data
Abstract. Data stream values are often associated with multiple aspects. For example, each value observed at a given time-stamp from environmental sensors may have an associated ty...
Jimeng Sun, Charalampos E. Tsourakakis, Evan Hoke,...