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» Tools for visually exploring biological networks
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BMCBI
2004
149views more  BMCBI 2004»
13 years 5 months ago
MiCoViTo: a tool for gene-centric comparison and visualization of yeast transcriptome states
Background: Information obtained by DNA microarray technology gives a rough snapshot of the transcriptome state, i.e., the expression level of all the genes expressed in a cell po...
Gaëlle Lelandais, Philippe Marc, Pierre Vince...
CAV
2012
Springer
241views Hardware» more  CAV 2012»
11 years 7 months ago
Bma: Visual Tool for Modeling and Analyzing Biological Networks
Abstract. BioModel Analyzer (bma) is a tool for modeling and analyzing biological networks. Designed with a lightweight graphical user interface, the tool facilitates usage for bio...
David Benque, Sam Bourton, Caitlin Cockerton, Byro...
BMCBI
2008
91views more  BMCBI 2008»
13 years 5 months ago
Presenting and exploring biological pathways with PathVisio
nd: Biological pathways are a useful abstraction of biological concepts, and software tools to deal with pathway diagrams can help biological research. PathVisio is a new visualiz...
Martijn P. van Iersel, Thomas Kelder, Alexander R....
BMCBI
2006
118views more  BMCBI 2006»
13 years 5 months ago
Exploration of biological network centralities with CentiBiN
Background: The elucidation of whole-cell regulatory, metabolic, interaction and other biological networks generates the need for a meaningful ranking of network elements. Central...
Björn H. Junker, Dirk Koschützki, Falk S...
HCI
2009
13 years 3 months ago
A Multiple-Aspects Visualization Tool for Exploring Social Networks
Social network analysis (SNA) has been used to study the relationships between actors in social networks, revealing their features and patterns. In most cases, nodes and edges in g...
Jie Gao, Kazuo Misue, Jiro Tanaka