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IROS
2006
IEEE
96views Robotics» more  IROS 2006»
13 years 10 months ago
Topological Mapping Inspired by Techniques in DNA Sequence Alignment
Abstract— This paper introduces a method of building topological maps using sequences of images and the approximate string matching algorithm, which is commonly used in DNA seque...
Alan M. Zhang, Lindsay Kleeman, R. Andrew Russell
BMCBI
2010
137views more  BMCBI 2010»
13 years 4 months ago
BS Seeker: precise mapping for bisulfite sequencing
Background: Bisulfite sequencing using next generation sequencers yields genome-wide measurements of DNA methylation at single nucleotide resolution. Traditional aligners are not ...
Pao-Yang Chen, Shawn Cokus, Matteo Pellegrini
VISUALIZATION
2005
IEEE
13 years 10 months ago
Topology-driven Surface Mappings with Robust Feature Alignment
Topological concepts and techniques have been broadly applied in computer graphics and geometric modeling. However, the homotopy type of a mapping between two surfaces has not bee...
Christopher Carner, Miao Jin, Xianfeng Gu, Hong Qi...
JCB
2007
94views more  JCB 2007»
13 years 4 months ago
A Quantile Method for Sizing Optical Maps
Optical mapping is an integrated system for the analysis of single DNA molecules. It constructs restriction maps (noted as “optical map”) from individual DNA molecules present...
Haifeng Li, Anton Valouev, David C. Schwartz, Mich...
ICIP
2009
IEEE
14 years 5 months ago
Bim: Image Matching Using Biological Gene Sequence Alignment
Matching two images with similar contents is one of the most fundamental tasks in image processing. Due to its importance, in recent years, many novel techniques have been propose...