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ICCV
2001
IEEE
14 years 6 months ago
Topology Free Hidden Markov Models: Application to Background Modeling
Hidden Markov Models (HMMs) are increasingly being used in computer vision for applications such as: gesture analysis, action recognition from video, and illumination modeling. Th...
Bjoern Stenger, Visvanathan Ramesh, Nikos Paragios...
BMCBI
2005
114views more  BMCBI 2005»
13 years 4 months ago
A new decoding algorithm for hidden Markov models improves the prediction of the topology of all-beta membrane proteins
Background: Structure prediction of membrane proteins is still a challenging computational problem. Hidden Markov models (HMM) have been successfully applied to the problem of pre...
Piero Fariselli, Pier Luigi Martelli, Rita Casadio
BMCBI
2010
117views more  BMCBI 2010»
13 years 4 months ago
New decoding algorithms for Hidden Markov Models using distance measures on labellings
Background: Existing hidden Markov model decoding algorithms do not focus on approximately identifying the sequence feature boundaries. Results: We give a set of algorithms to com...
Daniel G. Brown 0001, Jakub Truszkowski
BMCBI
2006
112views more  BMCBI 2006»
13 years 4 months ago
Algorithms for incorporating prior topological information in HMMs: application to transmembrane proteins
Background: Hidden Markov Models (HMMs) have been extensively used in computational molecular biology, for modelling protein and nucleic acid sequences. In many applications, such...
Pantelis G. Bagos, Theodore D. Liakopoulos, Stavro...
BMCBI
2008
170views more  BMCBI 2008»
13 years 4 months ago
Implementing EM and Viterbi algorithms for Hidden Markov Model in linear memory
Background: The Baum-Welch learning procedure for Hidden Markov Models (HMMs) provides a powerful tool for tailoring HMM topologies to data for use in knowledge discovery and clus...
Alexander G. Churbanov, Stephen Winters-Hilt