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BMCBI
2010
104views more  BMCBI 2010»
12 years 12 months ago
A systematic study of genome context methods: calibration, normalization and combination
Background: Genome context methods have been introduced in the last decade as automatic methods to predict functional relatedness between genes in a target genome using the patter...
Luciana Ferrer, Joseph M. Dale, Peter D. Karp
BMCBI
2011
12 years 8 months ago
RAG: An Update to the RNA-As-Graphs Resource
Background: In 2004, we presented a web resource for stimulating the search for novel RNAs, RNA-As-Graphs (RAG), which classified, catalogued, and predicted RNA secondary structur...
Joseph A. Izzo, Namhee Kim, Shereef Elmetwaly, Tam...
SDM
2011
SIAM
232views Data Mining» more  SDM 2011»
12 years 7 months ago
A Sequential Dual Method for Structural SVMs
In many real world prediction problems the output is a structured object like a sequence or a tree or a graph. Such problems range from natural language processing to computationa...
Shirish Krishnaj Shevade, Balamurugan P., S. Sunda...
STOC
2005
ACM
184views Algorithms» more  STOC 2005»
13 years 10 months ago
Coresets in dynamic geometric data streams
A dynamic geometric data stream consists of a sequence of m insert/delete operations of points from the discrete space {1, . . . , ∆}d [26]. We develop streaming (1 + )-approxim...
Gereon Frahling, Christian Sohler