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SPAA
2010
ACM
13 years 5 months ago
On the bit communication complexity of randomized rumor spreading
We study the communication complexity of rumor spreading in the random phone-call model. Suppose n players communicate in parallel rounds, where in each round every player calls a...
Pierre Fraigniaud, George Giakkoupis
BMCBI
2007
154views more  BMCBI 2007»
13 years 4 months ago
PepBank - a database of peptides based on sequence text mining and public peptide data sources
Background: Peptides are important molecules with diverse biological functions and biomedical uses. To date, there does not exist a single, searchable archive for peptide sequence...
Timur Shtatland, Daniel Guettler, Misha Kossodo, M...
BMCBI
2008
118views more  BMCBI 2008»
13 years 4 months ago
Inferring transcriptional compensation interactions in yeast via stepwise structure equation modeling
Background: With the abundant information produced by microarray technology, various approaches have been proposed to infer transcriptional regulatory networks. However, few appro...
Grace S. Shieh, Chung-Ming Chen, Ching-Yun Yu, Jui...
BMCBI
2007
134views more  BMCBI 2007»
13 years 4 months ago
Nearest Neighbor Networks: clustering expression data based on gene neighborhoods
Background: The availability of microarrays measuring thousands of genes simultaneously across hundreds of biological conditions represents an opportunity to understand both indiv...
Curtis Huttenhower, Avi I. Flamholz, Jessica N. La...
BMCBI
2006
109views more  BMCBI 2006»
13 years 4 months ago
A computational approach to discovering the functions of bacterial phytochromes by analysis of homolog distributions
Background: Phytochromes are photoreceptors, discovered in plants, that control a wide variety of developmental processes. They have also been found in bacteria and fungi, but for...
Tilman Lamparter