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    BMCBI
    2006
    119views more  BMCBI 2006»
    Utilization of two sample t-test statistics from redundant probe sets to evaluate different probe set algorithms in GeneChip stu
    13 years 5 months ago
    Utilization of two sample t-test statistics from redundant probe sets to evaluate different probe set algorithms in GeneChip stu
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    Background: The choice of probe set algorithms for expression summary in a GeneChip study has a great impact on subsequent gene expression data analysis. Spiked-in cRNAs with know...
    Zihua Hu, Gail R. Willsky
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    BMCBI
    2010
    102views more  BMCBI 2010»
    Quantized correlation coefficient for measuring reproducibility of ChIP-chip data
    13 years 5 months ago
    Quantized correlation coefficient for measuring reproducibility of ChIP-chip data
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    Background: Chromatin immunoprecipitation followed by microarray hybridization (ChIP-chip) is used to study protein-DNA interactions and histone modifications on a genome-scale. T...
    Shouyong Peng, Mitzi I. Kuroda, Peter J. Park
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    BMCBI
    2008
    120views more  BMCBI 2008»
    Statistical issues in the analysis of Illumina data
    13 years 5 months ago
    Statistical issues in the analysis of Illumina data
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    Background: Illumina bead-based arrays are becoming increasingly popular due to their high degree of replication and reported high data quality. However, little attention has been...
    Mark J. Dunning, Nuno L. Barbosa-Morais, Andy G. L...
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    BMCBI
    2004
    228views more  BMCBI 2004»
    An XML standard for the dissemination of annotated 2D gel electrophoresis data complemented with mass spectrometry results
    13 years 5 months ago
    An XML standard for the dissemination of annotated 2D gel electrophoresis data complemented with mass spectrometry results
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    Background: Many proteomics initiatives require a seamless bioinformatics integration of a range of analytical steps between sample collection and systems modeling immediately ass...
    Romesh Stanislaus, Liu Hong Jiang, Martha Swartz, ...
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