Sciweavers

45 search results - page 3 / 9
» Using Global Sequence Similarity to Enhance Biological Seque...
Sort
View
BMCBI
2010
129views more  BMCBI 2010»
13 years 6 months ago
Detection of distant evolutionary relationships between protein families using theory of sequence profile-profile comparison
Background: Detection of common evolutionary origin (homology) is a primary means of inferring protein structure and function. At present, comparison of protein families represent...
Mindaugas Margelevicius, Ceslovas Venclovas
CPM
2006
Springer
112views Combinatorics» more  CPM 2006»
13 years 9 months ago
Local Alignment of RNA Sequences with Arbitrary Scoring Schemes
Abstract. Local similarity is an important tool in comparative analysis of biological sequences, and is therefore well studied. In particular, the Smith-Waterman technique and its ...
Rolf Backofen, Danny Hermelin, Gad M. Landau, Oren...
GCB
2004
Springer
223views Biometrics» more  GCB 2004»
13 years 9 months ago
PoSSuMsearch: Fast and Sensitive Matching of Position Specific Scoring Matrices using Enhanced Suffix Arrays
: In biological sequence analysis, position specific scoring matrices (PSSMs) are widely used to represent sequence motifs. In this paper, we present a new nonheuristic algorithm, ...
Michael Beckstette, Dirk Strothmann, Robert Homann...
MICCAI
2005
Springer
13 years 11 months ago
Adaptive Spatio-Temporal Restoration for 4D Fluorescence Microscopic Imaging
Abstract. We present a spatio-temporal filtering method for significantly increasing the signal-to-noise ratio (SNR) in noisy fluorescence microscopic image sequences where smal...
Jérôme Boulanger, Charles Kervrann, P...
BMCBI
2004
125views more  BMCBI 2004»
13 years 5 months ago
A functional hierarchical organization of the protein sequence space
Background: It is a major challenge of computational biology to provide a comprehensive functional classification of all known proteins. Most existing methods seek recurrent patte...
Noam Kaplan, Moriah Friedlich, Menachem Fromer, Mi...