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» Using Treemaps to Visualize Phylogenetic Trees
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BMCBI
2010
142views more  BMCBI 2010»
13 years 5 months ago
pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
Background: Likelihood-based phylogenetic inference is generally considered to be the most reliable classification method for unknown sequences. However, traditional likelihood-ba...
Frederick A. Matsen III, Robin B. Kodner, E. Virgi...
BTW
2007
Springer
142views Database» more  BTW 2007»
13 years 11 months ago
Visually Exploring and Querying XML with BaseX
Abstract: XML documents are widely used as a generic container for textual contents. As they are increasingly growing in size, XML databases have come up to efficiently store and q...
Christian Grün, Alexander Holupirek, Marc H. ...
VISSYM
2004
13 years 6 months ago
Visual Triangulation of Network-Based Phylogenetic Trees
Phylogenetic trees are built by examining differences in the biological traits of a set of species. An example of such a trait is a biological network such as a metabolic pathway,...
Ulrik Brandes, Tim Dwyer, Falk Schreiber
BMCBI
2010
137views more  BMCBI 2010»
13 years 5 months ago
TreeGraph 2: Combining and visualizing evidence from different phylogenetic analyses
Background: Today it is common to apply multiple potentially conflicting data sources to a given phylogenetic problem. At the same time, several different inference techniques are...
Ben C. Stöver, Kai F. Müller
COMPGEOM
2008
ACM
13 years 7 months ago
Circular partitions with applications to visualization and embeddings
We introduce a hierarchical partitioning scheme of the Euclidean plane, called circular partitions. Such a partition consists of a hierarchy of convex polygons, each having small ...
Krzysztof Onak, Anastasios Sidiropoulos