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BMCBI
2008
202views more  BMCBI 2008»
13 years 5 months ago
Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data
Background: Integrating data from multiple global assays and curated databases is essential to understand the spatiotemporal interactions within cells. Different experiments measu...
Yuji Zhang, Jianhua Xuan, Benildo de los Reyes, Ro...
KDD
2003
ACM
142views Data Mining» more  KDD 2003»
14 years 6 months ago
Mining phenotypes and informative genes from gene expression data
Mining microarray gene expression data is an important research topic in bioinformatics with broad applications. While most of the previous studies focus on clustering either gene...
Chun Tang, Aidong Zhang, Jian Pei
CIKM
2005
Springer
13 years 11 months ago
Semantic similarity over the gene ontology: family correlation and selecting disjunctive ancestors
Many bioinformatics applications would benefit from comparing proteins based on their biological role rather than their sequence. In most biological databases, proteins are alrea...
Francisco M. Couto, Mário J. Silva, Pedro C...
KES
2005
Springer
13 years 11 months ago
Bayesian Validation of Fuzzy Clustering for Analysis of Yeast Cell Cycle Data
Clustering for the analysis of the gene expression profiles has been used for identifying the functions of the genes and of unknown genes. Since the genes usually belong to multipl...
Kyung-Joong Kim, Si-Ho Yoo, Sung-Bae Cho
ICASSP
2011
IEEE
12 years 9 months ago
A mutual information based approach for evaluating the quality of clustering
In this paper, a new method for evaluating the quality of clustering of genes is proposed based on mutual information criterion. Instead of using the conventional histogram-based ...
Shaikh Anowarul Fattah, Chia-Chun Lin, Sun-Yuan Ku...