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» Visualizations for taxonomic and phylogenetic trees
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BIOINFORMATICS
2004
41views more  BIOINFORMATICS 2004»
13 years 4 months ago
Visualizations for taxonomic and phylogenetic trees
Cynthia Sims Parr, Bongshin Lee, Dana Campbell, Be...
BMCBI
2010
118views more  BMCBI 2010»
13 years 5 months ago
From learning taxonomies to phylogenetic learning: Integration of 16S rRNA gene data into FAME-based bacterial classification
Background: Machine learning techniques have shown to improve bacterial species classification based on fatty acid methyl ester (FAME) data. Nonetheless, FAME analysis has a limit...
Bram Slabbinck, Willem Waegeman, Peter Dawyndt, Pa...
BMCBI
2010
153views more  BMCBI 2010»
13 years 5 months ago
VITCOMIC: visualization tool for taxonomic compositions of microbial communities based on 16S rRNA gene sequences
Background: Understanding the community structure of microbes is typically accomplished by sequencing 16S ribosomal RNA (16S rRNA) genes. These community data can be represented b...
Hiroshi Mori, Fumito Maruyama, Ken Kurokawa
BMCBI
2006
114views more  BMCBI 2006»
13 years 5 months ago
Taxonomic colouring of phylogenetic trees of protein sequences
Background: Phylogenetic analyses of protein families are used to define the evolutionary relationships between homologous proteins. The interpretation of protein-sequence phyloge...
Gareth Palidwor, Emmanuel G. Reynaud, Miguel A. An...