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BIBE
2005
IEEE
13 years 10 months ago
2005
IEEE
In this article we present novel preprocessing techniques, based on topological measures of the network, to identify clusters of proteins from Protein-protein interaction (PPI) ne...
BIBE
2005
IEEE
13 years 10 months ago
2005
IEEE
PSI-BLAST remains one of the popular tools for searching remote homologs in sequence databases. We recently demonstrated that hybrid alignment can function as the alignment core f...
BIBE
2005
IEEE
13 years 10 months ago
2005
IEEE
We address the issue of providing highly informative annotations using information revealed by the structured vocabularies of Gene Ontology (GO). For a target, a set of candidate ...
BIBE
2005
IEEE
13 years 10 months ago
2005
IEEE
Prediction of protein tertiary structure based on amino acid sequence is one of the most challenging open questions in computational molecular biology. The two most common experim...
BIBE
2005
IEEE
13 years 10 months ago
2005
IEEE
In this paper, we propose a Distance-based Sequence Indexing Method (DSIM) for indexing and searching genome databases. Borrowing the idea of video compression, we compress the ge...