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BIBE
2005
IEEE
126views Bioinformatics» more  BIBE 2005»
13 years 9 months ago
Highly Scalable and Accurate Seeds for Subsequence Alignment
We propose a method for finding seeds for the local alignment of two nucleotide sequences. Our method uses randomized algorithms to find approximate seeds. We present a dynamic ...
Abhijit Pol, Tamer Kahveci
BIBE
2005
IEEE
121views Bioinformatics» more  BIBE 2005»
13 years 9 months ago
RNA Pseudoknot Prediction Using Term Rewriting
RNA plays a critical role in mediating every step of cellular information transfer from genes to functional proteins. Pseudoknots are widely occurring structural motifs found in a...
Xuezheng Fu, Hao Wang, William L. Harrison, Robert...
BIBE
2007
IEEE
169views Bioinformatics» more  BIBE 2007»
13 years 10 months ago
Combining Semantics, Context, and Statistical Evidence in Genomics Literature Search
—We present an information retrieval model for combining evidence from concept-based semantics, term statistics, and context for improving search precision of genomics literature...
Jay Urbain, Nazli Goharian, Ophir Frieder