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CANDC
2004
ACM
13 years 4 months ago
Stochastic approaches for modelling in vivo reactions
In recent years, stochastic modelling has emerged as a physically more realistic alternative for modelling in vivo reactions. There are numerous stochastic approaches available in...
Thomas E. Turner, Santiago Schnell, Kevin Burrage
CANDC
2005
ACM
13 years 4 months ago
Haplotype assembly from aligned weighted SNP fragments
Given an assembled genome of a diploid organism the haplotype assembly problem can be formulated as retrieval of a pair of haplotypes from a set of aligned weighted SNP fragments....
Yu-Ying Zhao, Ling-Yun Wu, Ji-Hong Zhang, Rui-Shen...
CANDC
2004
ACM
13 years 4 months ago
Retrieving definitional content for ontology development
Ontology construction requires an understanding of the meaning and usage of its encoded concepts. While definitions found in dictionaries or glossaries may be adequate for many co...
Lawrence H. Smith, W. John Wilbur
CANDC
2004
ACM
13 years 4 months ago
Identification of related gene/protein names based on an HMM of name variations
Gene and protein names follow few, if any, true naming conventions and are subject to great variation in different occurrences of the same name. This gives rise to two important p...
Lana Yeganova, Lawrence H. Smith, W. John Wilbur
CANDC
2004
ACM
13 years 4 months ago
Cycling in ecological networks: Finn's index revisited
A chief cybernetic feature of natural living systems is the recycling of nutrients, which tends to enhance stability and is one of the principal causes of ecosystem complexity. In...
Stefano Allesina, Robert E. Ulanowicz