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BMCBI
2008
135views more  BMCBI 2008»
13 years 5 months ago
Identification of a small optimal subset of CpG sites as bio-markers from high-throughput DNA methylation profiles
Background: DNA methylation patterns have been shown to significantly correlate with different tissue types and disease states. High-throughput methylation arrays enable large-sca...
Hailong Meng, Edward Lenn Murrelle, Guoya Li
CPAIOR
2008
Springer
13 years 7 months ago
Efficient Haplotype Inference with Combined CP and OR Techniques
Abstract. Haplotype inference has relevant biological applications, and represents a challenging computational problem. Among others, pure parsimony provides a viable modeling appr...
Ana Graça, João Marques-Silva, In&ec...
CSCLP
2008
Springer
13 years 7 months ago
From Rules to Constraint Programs with the Rules2CP Modelling Language
In this paper, we present a rule-based modelling language for constraint programming, called Rules2CP. Unlike other modelling languages, Rules2CP adopts a single knowledge represen...
François Fages, Julien Martin
CORR
2008
Springer
148views Education» more  CORR 2008»
13 years 5 months ago
Conversion/Preference Games
We introduce the concept of Conversion/Preference Games, or CP games for short. CP games generalize the standard notion of strategic games. First we exemplify the use of CP games. ...
Stéphane Le Roux, Pierre Lescanne, Ren&eacu...
WALCOM
2008
IEEE
95views Algorithms» more  WALCOM 2008»
13 years 6 months ago
Indexing Circular Patterns
This paper deals with the Circular Pattern Matching Problem (CPM). In CPM, we are interested in pattern matching between the text T and the circular pattern C(P) of a given pattern...
Costas S. Iliopoulos, M. Sohel Rahman