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CPM
2005
Springer
106views Combinatorics» more  CPM 2005»
13 years 11 months ago
An Optimal Algorithm for Online Square Detection
A square is the concatenation of two identical non-empty strings. Let S be the input string which is given character by character. Let m be the (unknown) smallest integer such that...
Gen-Huey Chen, Jin-Ju Hong, Hsueh-I Lu
SIGMOD
2005
ACM
254views Database» more  SIGMOD 2005»
14 years 6 months ago
Conceptual Partitioning: An Efficient Method for Continuous Nearest Neighbor Monitoring
Given a set of objects P and a query point q, a k nearest neighbor (k-NN) query retrieves the k objects in P that lie closest to q. Even though the problem is well-studied for sta...
Kyriakos Mouratidis, Marios Hadjieleftheriou, Dimi...
CPM
2005
Springer
206views Combinatorics» more  CPM 2005»
13 years 11 months ago
A Fast Algorithm for Approximate String Matching on Gene Sequences
Abstract. Approximate string matching is a fundamental and challenging problem in computer science, for which a fast algorithm is highly demanded in many applications including tex...
Zheng Liu, Xin Chen, James Borneman, Tao Jiang
CPM
2005
Springer
101views Combinatorics» more  CPM 2005»
13 years 11 months ago
Succinct Suffix Arrays Based on Run-Length Encoding
A succinct full-text self-index is a data structure built on a text T = t1t2 . . . tn, which takes little space (ideally close to that of the compressed text), permits efficient se...
Veli Mäkinen, Gonzalo Navarro
CPM
2005
Springer
109views Combinatorics» more  CPM 2005»
13 years 11 months ago
Using PQ Trees for Comparative Genomics
Permutations on strings representing gene clusters on genomes have been studied earlier in [18, 14, 3, 12, 17] and the idea of a maximal permutation pattern was introduced in [12]....
Gad M. Landau, Laxmi Parida, Oren Weimann