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NAR
2011
196views Computer Vision» more  NAR 2011»
12 years 7 months ago
UniPROBE, update 2011: expanded content and search tools in the online database of protein-binding microarray data on protein-DN
The Universal PBM Resource for OligonucleotideBinding Evaluation (UniPROBE) database is a centralized repository of information on the DNAbinding preferences of proteins as determ...
Kimberly Robasky, Martha L. Bulyk
DNA
2011
Springer
213views Bioinformatics» more  DNA 2011»
12 years 4 months ago
Graph-Theoretic Formalization of Hybridization in DNA Sticker Complexes
Sticker complexes are a a formal graph-based data model for a restricted class of DNA complexes, motivated by potential applications to databases. This data model allows for a pure...
Robert Brijder, Joris J. M. Gillis, Jan Van den Bu...
DNA
2011
Springer
233views Bioinformatics» more  DNA 2011»
12 years 4 months ago
Less Haste, Less Waste: On Recycling and Its Limits in Strand Displacement Systems
We study the potential for molecule recycling in chemical reaction systems and their DNA strand displacement realizations. Recycling happens when a product of one reaction is a rea...
Anne Condon, Alan J. Hu, Ján Manuch, Chris ...
NAR
2011
209views Computer Vision» more  NAR 2011»
12 years 7 months ago
REPAIRtoire - a database of DNA repair pathways
REPAIRtoire is the first comprehensive database resource for systems biology of DNA damage and repair. The database collects and organizes the following types of information: (i) ...
Kaja Milanowska, Joanna Krwawicz, Grzegorz Papaj, ...