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JCB
2007

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A Structure-Based Flexible Search Method for Motifs in RNA

13 years 4 months ago

The discovery of non-coding RNA (ncRNA) motifs and their role in regulating gene expression has recently attracted considerable attention. The goal is to discover these motifs in ...

Isana Veksler-Lublinsky, Michal Ziv-Ukelson, Danny...

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19

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JCB
2007

130views more JCB 2007»

Bayesian Inference of MicroRNA Targets from Sequence and Expression Data

13 years 4 months ago

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MicroRNAs (miRNAs) regulate a large proportion of mammalian genes by hybridizing to targeted messenger RNAs (mRNAs) and down-regulating their translation into protein. Although mu...

Jim C. Huang, Quaid Morris, Brendan J. Frey

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14

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JCB
2007

94views more JCB 2007»

Locality and Gaps in RNA Comparison

13 years 4 months ago

Download cs.haifa.ac.il

Locality is an important and well-studied notion in comparative analysis of biological sequences. Similarly, taking into account afﬁne gap penalties when calculating biological ...

Rolf Backofen, Shihyen Chen, Danny Hermelin, Gad M...

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17

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JCB
2007

146views more JCB 2007»

MSOAR: A High-Throughput Ortholog Assignment System Based on Genome Rearrangement

13 years 4 months ago

Download www1.spms.ntu.edu.sg

The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving variou...

Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...

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