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This paper introduces the first integrated algorithm designed to discover novel motifs in heterogeneous sequence data, which is comprised of coregulated genes from a single genome...

Amol Prakash, Mathieu Blanchette, Saurabh Sinha, M...

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14

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PSB
2004

90views Applied Computing» more PSB 2004»

Phylogenetic Motif Detection by Expectation-Maximization on Evolutionary Mixtures

13 years 7 months ago

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ct The preferential conservation of transcription factor binding sites implies that non-coding sequence data from related species will prove a powerful asset to motif discovery. We...

Alan M. Moses, Derek Y. Chiang, Michael B. Eisen

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15

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PSB
2004

87views Applied Computing» more PSB 2004»

Modeling Cellular Processes with Variational Bayesian Cooperative Vector Quantizer

13 years 7 months ago

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Gene expression of a cell is controlled by sophisticated cellular processes. The capability of inferring the states of these cellular processes would provide insight into the mech...

Xinghua Lu, Milos Hauskrecht, Roger S. Day

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