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SSDBM
2006
IEEE
163views Database» more  SSDBM 2006»
13 years 10 months ago
ACache: Using Caching to Improve the Performance of Multiple Sequence Alignments
Multiple sequence alignment represents a class of powerful bioinformatics tools with many uses in computational biology ranging from discovery of characteristic motifs and conserv...
Xun Tu, Kajal T. Claypool, Cindy X. Chen
SSDBM
2006
IEEE
197views Database» more  SSDBM 2006»
13 years 10 months ago
InterJoin: Exploiting Indexes and Materialized Views in XPath Evaluation
XML has become the standard for data exchange for a wide variety of applications, particularly in the scientific community. In order to efficiently process queries on XML repres...
Derek Phillips, Ning Zhang 0002, Ihab F. Ilyas, M....
SSDBM
2006
IEEE
153views Database» more  SSDBM 2006»
13 years 10 months ago
HDF5-FastQuery: Accelerating Complex Queries on HDF Datasets using Fast Bitmap Indices
Large scale scientific data is often stored in scientific data formats such as FITS, netCDF and HDF. These storage formats are of particular interest to the scientific user com...
Luke J. Gosink, John Shalf, Kurt Stockinger, Keshe...