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DILS
2009
Springer
8 years 8 months ago
Slicing through the Scientific Literature
Abstract. Success in the life sciences depends on access to information in knowledge bases and literature. Finding and extracting the relevant information depends on a user's ...
Christopher J. O. Baker, Patrick Lambrix, Jonas La...
DILS
2010
Springer
8 years 11 months ago
On Matching Large Life Science Ontologies in Parallel
Matching life science ontologies to determine ontology mappings has recently become an active field of research. The large size of existing ontologies and the application of comple...
Anika Gross, Michael Hartung, Toralf Kirsten, Erha...
DILS
2010
Springer
8 years 11 months ago
Discovering Evolving Regions in Life Science Ontologies
Ontologies are heavily used in life sciences and evolve continuously to incorporate new or changed insights. Often ontology changes affect only specific parts (regions) of ontologi...
Michael Hartung, Anika Gross, Toralf Kirsten, Erha...
DILS
2010
Springer
8 years 11 months ago
Search Computing: Integrating Ranked Data in the Life Sciences
Search computing has been proposed to support the integration of the results of search engines with other data and computational resources. In essence, in search computing, search ...
Marco Masseroli, Norman W. Paton, Giorgio Ghisalbe...
DILS
2008
Springer
8 years 12 months ago
Analyzing the Evolution of Life Science Ontologies and Mappings
Abstract. Ontologies are heavily developed and used in life sciences and undergo continuous changes. However, the evolution of life science ontologies and references to them (e.g.,...
Michael Hartung, Toralf Kirsten, Erhard Rahm
DILS
2008
Springer
8 years 12 months ago
Semi Supervised Spectral Clustering for Regulatory Module Discovery
We propose a novel semi-supervised clustering method for the task of gene regulatory module discovery. The technique uses data on dna binding as prior knowledge to guide the proces...
Alok Mishra, Duncan Gillies
DILS
2008
Springer
8 years 12 months ago
Ontologies and Data Integration in Biomedicine: Success Stories and Challenging Issues
In this presentation, we review some examples of successful biomedical data integration projects in which ontologies play an important role, including the integration of genomic da...
Olivier Bodenreider
DILS
2008
Springer
8 years 12 months ago
Ontology Design Principles and Normalization Techniques in the Web
The open, decentralized nature of the Semantic Web demands fundamental changes in our approach to ontology development and deployment. To maximize the expressiveness and robustnes...
Xiaoshu Wang, Jonas S. Almeida, Arlindo L. Oliveir...
DILS
2008
Springer
8 years 12 months ago
Automatic Methods for Integrating Biomedical Data Sources in a Mediator-Based System
Fleur Mougin, Anita Burgun, Olivier Bodenreider, J...
DILS
2008
Springer
8 years 12 months ago
Chemical Knowledge for the Semantic Web
With over 80 file formats to represent various chemical attributes, the conversion between one format and another is invariably lossy due to informal specifications. In contrast, t...
Mykola Konyk, Alexander De Leon Battista, Michel D...
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