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ISBRA
2011
Springer
8 years 10 months ago
Query-Adaptive Ranking with Support Vector Machines for Protein Homology Prediction
Abstract. Protein homology prediction is a crucial step in templatebased protein structure prediction. The functions that rank the proteins in a database according to their homolog...
Yan Fu, Rong Pan, Qiang Yang, Wen Gao
BIBE
2010
IEEE
169views Bioinformatics» more  BIBE 2010»
8 years 10 months ago
A Novel Wavelet Based Algorithm for Spike and Wave Detection in Absence Epilepsy
—Absence seizures are characterized by sudden loss of consciousness and interruption of ongoing motor activities for a brief period of time lasting few to several seconds and up ...
Petros Xanthopoulos, Steffen Rebennack, Chang-Chia...

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stamosStudent, PhD
Department of Informatics and Telecommunications, University of Athens, Greece
stamos
JBI
2011
284views Bioinformatics» more  JBI 2011»
9 years 1 months ago
Towards an ontological representation of resistance: The case of MRSA
This paper addresses a family of issues surrounding the biological phenomenon of resistance and its representation in realist ontologies. Resistance terms from various existing on...
Albert Goldfain, Barry Smith, Lindsay G. Cowell
JBI
2010
212views Bioinformatics» more  JBI 2010»
9 years 1 months ago
Cloud computing: A new business paradigm for biomedical information sharing
We examine how the biomedical informatics (BMI) community, especially consortia that share data and applications, can take advantage of a new resource called cloud computing. Clou...
Arnon Rosenthal, Peter Mork, Maya Hao Li, Jean Sta...
BCB
2010
175views Bioinformatics» more  BCB 2010»
9 years 1 months ago
Gene set analysis using principal components
We present a new method for identifying gene sets associated with labeled samples, where the labels can be case versus control, or genotype differences. Existing approaches to thi...
Isa Kemal Pakatci, Wei Wang, Leonard McMillan
BCB
2010
213views Bioinformatics» more  BCB 2010»
9 years 1 months ago
Markov clustering of protein interaction networks with improved balance and scalability
Markov Clustering (MCL) is a popular algorithm for clustering networks in bioinformatics such as protein-protein interaction networks and protein similarity networks. An important...
Venu Satuluri, Srinivasan Parthasarathy, Duygu Uca...
JBI
2011
283views Bioinformatics» more  JBI 2011»
9 years 1 months ago
Cross-product extensions of the Gene Ontology
The Gene Ontology is being normalized and extended to include computable logical definitions. These definitions are partitioned into mutually exclusive cross-product sets, many of...
Christopher J. Mungall, Michael Bada, Tanya Z. Ber...
JBI
2011
233views Bioinformatics» more  JBI 2011»
9 years 1 months ago
A set of ontologies to drive tools for the control of vector-borne diseases
We are developing a set of ontologies that deal with vector-borne diseases and the arthropod vectors that transmit them. For practical reasons (application priorities), we initiat...
Pantelis Topalis, Emmanuel Dialynas, Elvira Mitrak...
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