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BIBE
2010
IEEE
135views Bioinformatics» more  BIBE 2010»
9 years 9 months ago
Finding Dynamic Modules of Biological Regulatory Networks
—Often groups of genes in regulatory networks, also called modules, work collaboratively on similar functions. Mathematically, the modules in a regulatory network has often been ...
Ferhat Ay, Thang N. Dinh, My T. Thai, Tamer Kahvec...
BIBE
2010
IEEE
155views Bioinformatics» more  BIBE 2010»
9 years 9 months ago
Detection of Mild Cognitive Impairment Using Image Differences and Clinical Features
Lin Li, James Z. Wang, Dheeraj Chahal, Mark A. Eck...
BIBE
2010
IEEE
143views Bioinformatics» more  BIBE 2010»
9 years 10 months ago
The Effect of Sequence Error and Partial Training Data on BLAST Accuracy
- Metagenomics is the study of environmental samples. Because few tools exist for metagenomic analysis, a natural step has been to utilize the popular homology tool, BLAST, to sear...
Steven D. Essinger, Gail L. Rosen
BIBE
2010
IEEE
181views Bioinformatics» more  BIBE 2010»
9 years 10 months ago
Multi Level Clustering of Phylogenetic Profiles
The prediction of gene function from genome sequences is one of the main issues in Bioinformatics. Most computational approaches are based on the similarity between sequences to in...
Fotis E. Psomopoulos, Pericles A. Mitkas
BIBE
2010
IEEE
144views Bioinformatics» more  BIBE 2010»
9 years 10 months ago
Knowledge-Guided Docking of Flexible Ligands to SH2 Domain Proteins
Studies of interactions between protein domains and ligands are important in many aspects such as cellular signaling and regulation. In this work, we applied a three-stage knowledg...
Haiyun Lu, Shamima Banu Bte Sm Rashid, Hao Li, Wee...
BIBE
2010
IEEE
146views Bioinformatics» more  BIBE 2010»
9 years 10 months ago
Methods for Designing Reliable Probe Arrays
Recent advances in biosensing technologies have led to applications of biosensor probe arrays for rapid identification of biological agents such as drugs, gene expressions, protein...
Michele Lombardi, Luca Benini, Abhishek Garg, Giov...
BIBE
2010
IEEE
137views Bioinformatics» more  BIBE 2010»
9 years 10 months ago
Comparison of Gene Prediction Programs for Metagenomic Data
This manuscript presents the most rigorous benchmarking of gene annotation algorithms for metagenomic datasets to date. We compare three different programs: GeneMark, MetaGeneAnnot...
Non Yok, Gail Rosen
BIRD
2008
Springer
177views Bioinformatics» more  BIRD 2008»
9 years 10 months ago
GENFOCS - A Comparative Tool on Gene Finding with Sensitivity and Specificity
  The  latest  developments  in  DNA  sequencing  tech­  niques paved the way for tremendous increase in bio­  logical databases. Once the whole DNA sequen...
M. A. Lijo Anto, G. Gopakumar, Achuthsankar S. Nai...
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