CANDC
2004
ACM
13 years 5 months ago
2004
ACM
Increasingly, scientists have begun to tackle gene functions and other complex regulatory processes by studying organisms at the global scales for various levels of biological org...
CANDC
2004
ACM
13 years 5 months ago
2004
ACM
In recent years, stochastic modelling has emerged as a physically more realistic alternative for modelling in vivo reactions. There are numerous stochastic approaches available in...
CANDC
2004
ACM
13 years 5 months ago
2004
ACM
Ontology construction requires an understanding of the meaning and usage of its encoded concepts. While definitions found in dictionaries or glossaries may be adequate for many co...
CANDC
2004
ACM
13 years 5 months ago
2004
ACM
We have addressed the distribution and abundance of 75 transcription factor (TF) families in complete genomes from 90 different bacterial and archaeal species. We found that the p...
CANDC
2004
ACM
13 years 5 months ago
2004
ACM
Genomic analyses on part of Escherichia coli's chromosome had suggested the existence of a GATC regulated network. This has recently been confirmed through a transcriptome an...
CANDC
2004
ACM
13 years 5 months ago
2004
ACM
The exponential growth of large-scale molecular sequence data and of the PubMed scientific literature has prompted active research in biological literature mining and information ...
CANDC
2004
ACM
13 years 5 months ago
2004
ACM
A chief cybernetic feature of natural living systems is the recycling of nutrients, which tends to enhance stability and is one of the principal causes of ecosystem complexity. In...
CANDC
2005
ACM
13 years 5 months ago
2005
ACM
Given an assembled genome of a diploid organism the haplotype assembly problem can be formulated as retrieval of a pair of haplotypes from a set of aligned weighted SNP fragments....
CANDC
2005
ACM
13 years 5 months ago
2005
ACM
We propose an algorithm of global multiple sequence alignment that is based on a measure of what we call information discrepancy. The algorithm follows a progressive alignment ite...
CANDC
2005
ACM
13 years 5 months ago
2005
ACM
The task of the quartet puzzling problem is to find a best-fitting binary X-tree for a finite n-set from confidence values for the 3 n 4 binary trees with exactly four leaves from...