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BIBM
2007
IEEE
133views Bioinformatics» more  BIBM 2007»
13 years 4 months ago
Mining Clinical Data with a Temporal Dimension: A Case Study
Clinical databases store large amounts of information about patients and their medical conditions. Data mining techniques can extract relationships and patterns holding in this we...
Michele Berlingerio, Francesco Bonchi, Fosca Giann...
BIBM
2007
IEEE
104views Bioinformatics» more  BIBM 2007»
13 years 8 months ago
A Protocol to Detect Local Affinities Involved in Proteins Distant Interactions
The tridimensional structure of a protein is constrained or stabilized by some local interactions between distant residues of the protein, such as disulfide bonds, electrostatic i...
Christophe Nicolas Magnan, Cécile Capponi, ...
BIBM
2007
IEEE
110views Bioinformatics» more  BIBM 2007»
13 years 8 months ago
Risk Factor Searching Heuristics for SNP Case-Control Studies
This paper addresses the computational challenge facing association analysis of case-control studies
Dumitru Brinza, Alexander Zelikovsky
BIBM
2007
IEEE
149views Bioinformatics» more  BIBM 2007»
13 years 8 months ago
An Algorithm for Assigning Unique Keys to Metabolic Pathways
Different databases of metabolic pathways assign pathways different keys. For this reason, it is difficult to automatically compare pathways across databases. We introduce an algo...
Fang Fang, Robert L. Grossman, Xiangjun Liu
BIBM
2007
IEEE
13 years 8 months ago
Multi-topic Aspects in Clinical Text Classification
This paper investigates multi-topic aspects in automatic classification of clinical free text. In many practical situations, we need to deal with documents overlapping with multip...
Yutaka Sasaki, Brian Rea, Sophia Ananiadou
BIBM
2007
IEEE
139views Bioinformatics» more  BIBM 2007»
13 years 8 months ago
Automatic Identification of Temporal Sequences in Chewing Sounds
Chewing is an essential part of food intake. The analysis and detection of food patterns is an important component of an automatic dietary monitoring system. However chewing is a t...
Oliver Amft, Martin Kusserow, Gerhard Tröster
BIBM
2007
IEEE
13 years 10 months ago
A Semi-supervised Learning Approach to Disease Gene Prediction
Discovering human disease-causing genes (disease genes in short) is one of the most challenging problems in bioinformatics and biomedicine, as most diseases are related in some wa...
Thanh Phuong Nguyen, Tu Bao Ho
BIBM
2007
IEEE
135views Bioinformatics» more  BIBM 2007»
13 years 10 months ago
Graph Kernel-Based Learning for Gene Function Prediction from Gene Interaction Network
Prediction of gene functions is a major challenge to biologists in the post-genomic era. Interactions between genes and their products compose networks and can be used to infer ge...
Xin Li, Zhu Zhang, Hsinchun Chen, Jiexun Li
BIBM
2007
IEEE
137views Bioinformatics» more  BIBM 2007»
13 years 10 months ago
A Multi-metric Similarity Based Analysis of Microarray Data
Clustering has been shown to be effective in analyzing functional relationships of genes. However, no single clustering method with single distance metric is capable of capturing ...
Fatih Altiparmak, Selnur Erdal, Ozgur Ozturk, Haka...
BIBM
2007
IEEE
101views Bioinformatics» more  BIBM 2007»
13 years 10 months ago
Improved Methods for Template-Matching in Electron-Density Maps Using Spherical Harmonics
An important problem in high-throughput protein crystallography is constructing a protein model from an electron-density map. Previous work by some of this paper’s authors [1] d...
Frank DiMaio, Ameet Soni, George N. Phillips, Jude...