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CORR
2010
Springer
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13 years 1 months ago
SABRE: A Tool for Stochastic Analysis of Biochemical Reaction Networks
The importance of stochasticity within biological systems has been shown repeatedly during the last years and has raised the need for efficient stochastic tools. We present SABRE, ...
Frédéric Didier, Thomas A. Henzinger...
BMCBI
2005
156views more  BMCBI 2005»
13 years 4 months ago
A new dynamical layout algorithm for complex biochemical reaction networks
Background: To study complex biochemical reaction networks in living cells researchers more and more rely on databases and computational methods. In order to facilitate computatio...
Katja Wegner, Ursula Kummer
BIOCOMP
2007
13 years 6 months ago
Interaction Models for Biochemical Reactions
Abstract—This paper presents a stochastic modelling framework for complex biochemical reaction networks from a component-based perspective. Our approach takes into account the di...
Mila E. Majster-Cederbaum, Nils Semmelrock, Verena...