PSB
2010
13 years 2 months ago
2010
rmed at a conceptual level, in terms of abstract biochemical reactions
BIOCOMP
2010
13 years 2 months ago
2010
Abstract-- Modeling the intermolecular reactions in a single cell is a critical problem in computational biology. Biochemical reaction systems often involve species in both low and...
JIB
2007
13 years 4 months ago
2007
Systems biology is an emerging field that aims at obtaining a system-level understanding of biological processes. The modelling and simulation of networks of biochemical reactions...
BMCBI
2008
13 years 4 months ago
2008
Background: Enzymes are responsible for the catalysis of the biochemical reactions in metabolic pathways. Analogous enzymes are able to catalyze the same reactions, but they prese...
KES
2004
Springer
13 years 9 months ago
2004
Springer
We consider the problem of inferring kinetic mechanisms for biochemical reactions from time series data. Using a priori knowledge about the structure of chemical reaction kinetics ...
ECAI
2004
Springer
13 years 10 months ago
2004
Springer
We provide a logical model of biochemical reactions and show how hypothesis generation using weakest sufficient and strongest necessary conditions may be used to provide addition...
ICCAD
2008
IEEE
14 years 1 months ago
2008
IEEE
—We are developing a framework for computation with biochemical reactions with a focus on synthesizing specific logical functionality, a task analogous to technology-independent...
DAC
2007
ACM
14 years 5 months ago
2007
ACM
Randomness is inherent to biochemistry: at each instant, the sequence of reactions that fires is a matter of chance. Some biological systems exploit such randomness, choosing betw...