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CORR
2010
Springer
83views Education» more  CORR 2010»
13 years 4 months ago
Sentence Simplification Aids Protein-Protein Interaction Extraction
Accurate systems for extracting ProteinProtein Interactions (PPIs) automatically from biomedical articles can help accelerate biomedical research. Biomedical Informatics researche...
Siddhartha Jonnalagadda, Graciela Gonzalez
BMCBI
2007
124views more  BMCBI 2007»
13 years 4 months ago
BioInfer: a corpus for information extraction in the biomedical domain
Background: Lately, there has been a great interest in the application of information extraction methods to the biomedical domain, in particular, to the extraction of relationship...
Sampo Pyysalo, Filip Ginter, Juho Heimonen, Jari B...
BMCBI
2007
152views more  BMCBI 2007»
13 years 4 months ago
PASSIM - an open source software system for managing information in biomedical studies
Background: One of the crucial aspects of day-to-day laboratory information management is collection, storage and retrieval of information about research subjects and biomedical s...
Juris Viksna, Edgars Celms, Martins Opmanis, Karli...
BMCBI
2010
154views more  BMCBI 2010»
13 years 4 months ago
LINNAEUS: A species name identification system for biomedical literature
Background: The task of recognizing and identifying species names in biomedical literature has recently been regarded as critical for a number of applications in text and data min...
Martin Gerner, Goran Nenadic, Casey M. Bergman
BIB
2008
145views more  BIB 2008»
13 years 4 months ago
Biomedical ontologies: a functional perspective
The information explosion in biology makes it difficult for researchers to stay abreast of current biomedical knowledge and to make sense of the massive amounts of online informat...
Daniel L. Rubin, Nigam Shah, Natalya Fridman Noy
ICA
2010
Springer
13 years 4 months ago
The 2010 Signal Separation Evaluation Campaign (SiSEC2010): Biomedical Source Separation
We present an overview of the biomedical part of the 2010 community-based Signal Separation Evaluation Campaign (SiSEC2010), coordinated by the authors. In addition to the audio ta...
Shoko Araki, Fabian J. Theis, Guido Nolte, Dominik...
CIKM
2008
Springer
13 years 6 months ago
In the development of a spanish metamap
MetaMap is an online application that allows mapping text to UMLS Metathesaurus concepts, which is very useful interoperability among different languages and systems within the bi...
Francisco M. Carrero, José Carlos Cortizo, ...
DRR
2010
13 years 7 months ago
Biomedical article retrieval using multimodal features and image annotations in region-based CBIR
Biomedical images are invaluable in establishing diagnosis, acquiring technical skills, and implementing best practices in many areas of medicine. At present, images needed for in...
Daekeun You, Sameer Antani, Dina Demner-Fushman, M...
CIKM
2009
Springer
13 years 9 months ago
Probabilistic models for topic learning from images and captions in online biomedical literatures
Biomedical images and captions are one of the major sources of information in online biomedical publications. They often contain the most important results to be reported, and pro...
Xin Chen, Caimei Lu, Yuan An, Palakorn Achananupar...
VLDB
2004
ACM
257views Database» more  VLDB 2004»
13 years 10 months ago
BioPatentMiner: An Information Retrieval System for BioMedical Patents
Before undertaking new biomedical research, identifying concepts that have already been patented is essential. Traditional keyword based search on patent databases may not be suï¬...
Sougata Mukherjea, Bhuvan Bamba