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BMCBI
2005
116views more  BMCBI 2005»
8 years 5 months ago
Automating Genomic Data Mining via a Sequence-based Matrix Format and Associative Rule Set
There is an enormous amount of information encoded in each genome
Jonathan D. Wren, David Johnson, Le Gruenwald
BMCBI
2005
79views more  BMCBI 2005»
8 years 5 months ago
Data preparation and interannotator agreement: BioCreAtIvE Task 1B
Marc E. Colosimo, Alexander A. Morgan, Alexander S...
BMCBI
2005
121views more  BMCBI 2005»
8 years 5 months ago
Quality control and quality assessment of data from surface-enhanced laser desorption/ionization (SELDI) time-of flight (TOF) ma
Background: Proteomic profiling of complex biological mixtures by the ProteinChip technology of surfaceenhanced laser desorption/ionization time-of-flight (SELDI-TOF) mass spectro...
Huixiao Hong, Yvonne P. Dragan, Joshua Epstein, Ca...
BMCBI
2005
84views more  BMCBI 2005»
8 years 5 months ago
Cross-platform comparability of microarray technology: Intra-platform consistency and appropriate data analysis procedures are e
Background: The acceptance of microarray technology in regulatory decision-making is being challenged by the existence of various platforms and data analysis methods. A recent rep...
Leming M. Shi, Weida Tong, Hong Fang, Uwe Scherf, ...
BMCBI
2005
178views more  BMCBI 2005»
8 years 5 months ago
A quantization method based on threshold optimization for microarray short time series
Background: Reconstructing regulatory networks from gene expression profiles is a challenging problem of functional genomics. In microarray studies the number of samples is often ...
Barbara Di Camillo, Fatima Sanchez-Cabo, Gianna To...
BMCBI
2005
148views more  BMCBI 2005»
8 years 5 months ago
NemaFootPrinter: a web based software for the identification of conserved non-coding genome sequence regions between C. elegans
Background: NemaFootPrinter (Nematode Transcription Factor Scan Through Philogenetic Footprinting) is a web-based software for interactive identification of conserved, non-exonic ...
Davide Rambaldi, Alessandro Guffanti, Paolo Morand...
BMCBI
2005
111views more  BMCBI 2005»
8 years 5 months ago
Improving interoperability between microbial information and sequence databases
Background: Biological resources are essential tools for biomedical research. Their availability is promoted through on-line catalogues. Common Access to Biological Resources and ...
Paolo Romano, Peter Dawyndt, Francesca Piersigilli...
BMCBI
2005
83views more  BMCBI 2005»
8 years 5 months ago
Genome-wide estimation of gender differences in the gene expression of human livers: Statistical design and analysis
Background: Gender differences in gene expression were estimated in liver samples from 9 males and 9 females. The study tested 31,110 genes for a gender difference using a design ...
Robert R. Delongchamp, Cruz Velasco, Stacey Dial, ...
BMCBI
2005
104views more  BMCBI 2005»
8 years 5 months ago
An integrated approach of immunogenomics and bioinformatics to identify new Tumor Associated Antigens (TAA) for mammary cancer i
Background: Neoplastic transformation is a multistep process in which distinct gene products of specific cell regulatory pathways are involved at each stage. Identification of ove...
Federica Cavallo, Annalisa Astolfi, Manuela Iezzi,...
BMCBI
2005
114views more  BMCBI 2005»
8 years 5 months ago
Systematic analysis of human kinase genes: a large number of genes and alternative splicing events result in functional and stru
Background: Protein kinases are a well defined family of proteins, characterized by the presence of a common kinase catalytic domain and playing a significant role in many importa...
Luciano Milanesi, Mauro Petrillo, Leandra Sepe, An...
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