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    JCC
    2008
    166views more  JCC 2008»
    Reference energy extremal optimization: A stochastic search algorithm applied to computational protein design
    13 years 4 months ago
    Reference energy extremal optimization: A stochastic search algorithm applied to computational protein design
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    : We adapt a combinatorial optimization algorithm, extremal optimization (EO), for the search problem in computational protein design. This algorithm takes advantage of the knowled...
    Naigong Zhang, Chen Zeng
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    BMCBI
    2008
    114views more  BMCBI 2008»
    Testing the Coulomb/Accessible Surface Area solvent model for protein stability, ligand binding, and protein design
    13 years 4 months ago
    Testing the Coulomb/Accessible Surface Area solvent model for protein stability, ligand binding, and protein design
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    Background: Protein structure prediction and computational protein design require efficient yet sufficiently accurate descriptions of aqueous solvent. We continue to evaluate the ...
    Marcel Schmidt am Busch, Anne Lopes, Najette Amara...
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