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DILS
2005
Springer
9 years 2 days ago
Assigning Unique Keys to Chemical Compounds for Data Integration: Some Interesting Counter Examples
Integrating data involving chemical structures is simplified when unique identifiers (UIDs) can be associated with chemical structures. For example, these identifiers can be use...
Greeshma Neglur, Robert L. Grossman, Bing Liu
DILS
2005
Springer
9 years 3 months ago
The Multiple Roles of Ontologies in the BioMediator Data Integration System
BioMediator is a data integration system that provides a common interface to multiple Internet-accessible databases containing information about genetics and molecular biology. Ont...
Peter Mork, Ron Shaker, Peter Tarczy-Hornoch
DILS
2005
Springer
9 years 3 months ago
Cluster Based Integration of Heterogeneous Biological Databases Using the AutoMed Toolkit
This paper presents an extensible architecture that can be used to support the integration of heterogeneous biological data sets. In our architecture, a clustering approach has bee...
Michael Maibaum, Lucas Zamboulis, Galia Rimon, Chr...
DILS
2005
Springer
9 years 3 months ago
Semantic Correspondence in Federated Life Science Data Integration Systems
For execution of complex biological queries, data integration systems often use several intermediate data sources because the domain coverage of individual sources is limited. Qual...
Malika Mahoui, Harshad Kulkarni, Nianhua Li, Zina ...
DILS
2005
Springer
9 years 3 months ago
BioNavigation: Selecting Optimum Paths Through Biological Resources to Evaluate Ontological Navigational Queries
Publicly available biological resources form a complex maze of highly heterogeneous data sources, interconnected by navigational capabilities and applications. Although it offers ...
Zoé Lacroix, Kaushal Parekh, Maria-Esther V...
DILS
2005
Springer
9 years 3 months ago
Hybrid Integration of Molecular-Biological Annotation Data
: We present a new approach to integrate annotation data from public sources for the expression analysis of genes and proteins. Expression data is materialized in a data warehouse ...
Toralf Kirsten, Hong Hai Do, Christine Körner...
DILS
2005
Springer
9 years 3 months ago
Factors Affecting Ontology Development in Ecology
Few ontologies in the ecological domain exist, but their development can take advantage of gained experience in other domains and from existing modeling practices in ecology. Taxon...
C. Maria Keet
DILS
2005
Springer
9 years 3 months ago
Integrating Heterogeneous Microarray Data Sources Using Correlation Signatures
Abstract. Microarrays are one of the latest breakthroughs in experimental molecular biology. Thousands of different research groups generate tens of thousands of microarray gene e...
Jaewoo Kang, Jiong Yang, Wanhong Xu, Pankaj Chopra
DILS
2005
Springer
9 years 3 months ago
Support for BioIndexing in BLASTgres
The ability to perform genome-wide and cross-genome data analyses can dramatically reduce the time required for new biological discoveries. This raises important issues in bioinfor...
Ruey-Lung Hsiao, Douglas Stott Parker Jr., Hung-ch...
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