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NAR
2011
267views Computer Vision» more  NAR 2011»
9 years 1 months ago
EcoCyc: a comprehensive database of Escherichia coli biology
EcoCyc (http://EcoCyc.org) is a comprehensive model organism database for Escherichia coli K-12 MG1655. From the scientific literature, EcoCyc captures the functions of individual...
Ingrid M. Keseler, Julio Collado-Vides, Alberto Sa...
NAR
2010
106views more  NAR 2010»
9 years 1 months ago
InParanoid 7: new algorithms and tools for eukaryotic orthology analysis
The InParanoid project gathers proteomes of completely sequenced eukaryotic species plus Escherichia coli and calculates pairwise ortholog relationships among them. The new releas...
Gabriel Östlund, Thomas Schmitt, Kristoffer F...
NAR
1998
100views more  NAR 1998»
9 years 6 months ago
RegulonDB: a database on transcriptional regulation in Escherichia coli
RegulonDB is a DataBase that integrates biological knowledge of the mechanisms that regulate the transcription initiation in Escherichia coli, as well as knowledge on the organiza...
Araceli M. Huerta, Heladia Salgado, Denis Thieffry...
NAR
1998
76views more  NAR 1998»
9 years 6 months ago
The Database of Ribosomal Cross links (DRC)
The Database of Ribosomal Cross-links (DRC) provides a complete collection of all the published data produced by cross-linking studies on the Escherichia coli ribosome, as well as...
Pavel V. Baranov, Petr V. Sergiev, Olga A. Dontsov...
BMCBI
2007
160views more  BMCBI 2007»
9 years 7 months ago
Optimization based automated curation of metabolic reconstructions
Background: Currently, there exists tens of different microbial and eukaryotic metabolic reconstructions (e.g., Escherichia coli, Saccharomyces cerevisiae, Bacillus subtilis) with...
Vinay Satish Kumar, Madhukar S. Dasika, Costas D. ...
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