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BMCBI
2006
147views more  BMCBI 2006»
13 years 4 months ago
Grouping Gene Ontology terms to improve the assessment of gene set enrichment in microarray data
Background: Gene Ontology (GO) terms are often used to assess the results of microarray experiments. The most common way to do this is to perform Fisher's exact tests to find...
Alex Lewin, Ian C. Grieve
BMCBI
2006
169views more  BMCBI 2006»
13 years 4 months ago
Finding biological process modifications in cancer tissues by mining gene expression correlations
Background: Through the use of DNA microarrays it is now possible to obtain quantitative measurements of the expression of thousands of genes from a biological sample. This techno...
Giacomo Gamberoni, Sergio Storari, Stefano Volinia
LREC
2008
124views Education» more  LREC 2008»
13 years 6 months ago
Clustering Related Terms with Definitions
It is a challenging task to match similar or related terms/expressions in NLP and Text Mining applications. Two typical areas in need for such work are terminology and ontology co...
Scott Songlin Piao, John McNaught, Sophia Ananiado...
ISBRA
2007
Springer
13 years 10 months ago
Discovering Relations Among GO-Annotated Clusters by Graph Kernel Methods
The biological interpretation of large-scale gene expression data is one of the challenges in current bioinformatics. The state-of-theart approach is to perform clustering and then...
Italo Zoppis, Daniele Merico, Marco Antoniotti, Bu...