Sciweavers

CIBCB
2007
IEEE
13 years 7 months ago
Associative Artificial Neural Network for Discovery of Highly Correlated Gene Groups Based on Gene Ontology and Gene Expression
Abstract-- The advance of high-throughput experimental technologies poses continuous challenges to computational data analysis in functional and comparative genomics studies. Gene ...
Ji He, Xinbin Dai, Xuechun Zhao
BIBE
2009
IEEE
102views Bioinformatics» more  BIBE 2009»
13 years 7 months ago
Online Discovery and Refinement of Novel Genes Using GeneScope
We present a novel gene finding and validation tool, called GeneScope, which is capable of finding and validating genes declaratively by autonomously integrating heterogeneous onl...
Hasan M. Jamil, J. Jesmin
ISAAC
1998
Springer
99views Algorithms» more  ISAAC 1998»
13 years 7 months ago
On the Multiple Gene Duplication Problem
Abstract. A fundamental problem in computational biology is the determination of the correct species tree for a set of taxa given a set of possibly contradictory gene trees. In rec...
Michael R. Fellows, Michael T. Hallett, Ulrike Ste...
HICSS
2002
IEEE
127views Biometrics» more  HICSS 2002»
13 years 8 months ago
Interactive Visualization and Analysis for Gene Expression Data
Currently, the cDNA and genomic sequence projects are processing at such a rapid rate that more and more gene data become available. New methods are needed to efficiently and eff...
Chun Tang, Li Zhang, Aidong Zhang
ECCB
2003
IEEE
13 years 9 months ago
Gene networks inference using dynamic Bayesian networks
This article deals with the identification of gene regulatory networks from experimental data using a statistical machine learning approach. A stochastic model of gene interactio...
Bruno-Edouard Perrin, Liva Ralaivola, Aurél...
BIOADIT
2004
Springer
13 years 9 months ago
Analysis of Responses of Complex Bionetworks to Changes in Environmental Conditions
Abstract. The responses of flexible bionetworks to extreme environmental changes were studied in several microorganisms. Gene and metabolic networks markedly changed with osmotic ...
Hiroshi Shimizu, Takashi Hirasawa, Keisuke Nagahis...
SIGIR
2005
ACM
13 years 9 months ago
An application of text categorization methods to gene ontology annotation
This paper describes an application of IR and text categorization methods to a highly practical problem in biomedicine, specifically, Gene Ontology (GO) annotation. GO annotation...
Kazuhiro Seki, Javed Mostafa
CSB
2005
IEEE
118views Bioinformatics» more  CSB 2005»
13 years 9 months ago
Gene Teams with Relaxed Proximity Constraint
Functionally related genes co-evolve, probably due to the strong selection pressure in evolution. Thus we expect that they are present in multiple genomes. Physical proximity amon...
Sun Kim, Jeong-Hyeon Choi, Jiong Yang
CIBCB
2005
IEEE
13 years 9 months ago
Predicting Single Genes Related to Immune-Relevant Processes
— In this paper we address the problem of predicting gene activities by finding gene regulatory dependencies in experimental DNA microarray data. Only few approaches to infer th...
Christian Spieth, Felix Streichert, Nora Speer, Ch...
ISDA
2008
IEEE
13 years 10 months ago
Combining Clustering and Bayesian Network for Gene Network Inference
Gene network reconstruction is a multidisciplinary research area involving data mining, machine learning, statistics, ontologies and others. Reconstructed gene network allows us t...
Suhaila Zainudin, Safaai Deris