BMCBI
2004
13 years 4 months ago
2004
Background: Recent technological advances in high-throughput data collection allow for experimental study of increasingly complex systems on the scale of the whole cellular genome...
BMCBI
2004
13 years 4 months ago
2004
Background: Ranked gene lists from microarray experiments are usually analysed by assigning significance to predefined gene categories, e.g., based on functional annotations. Tool...
TSMC
2008
13 years 4 months ago
2008
Abstract-- This paper presents a method that uses gene ontologies, together with the paradigm of relational subgroup discovery, to find compactly described groups of genes differen...
CANDC
2005
ACM
13 years 4 months ago
2005
ACM
Overlapping genes in mammalian genomes are unexpected phenomena even though hundreds of pairs of protein coding overlapping genes have been reported so far. Overlapping genes can ...
BMCBI
2005
13 years 4 months ago
2005
Background: The identification of mentions of gene or gene products in biomedical texts is a critical step in the development of text mining applications in biosciences. The compl...
BMCBI
2005
13 years 4 months ago
2005
Background: Our goal in BioCreAtIve has been to assess the state of the art in text mining, with emphasis on applications that reflect real biological applications, e.g., the cura...
BMCBI
2005
13 years 4 months ago
2005
Background: Identification of gene and protein names in biomedical text is a challenging task as the corresponding nomenclature has evolved over time. This has led to multiple syn...
BMCBI
2005
13 years 4 months ago
2005
In task 1A of the BioCreAtIvE evaluation, systems had to be devised that recognize words and phrases forming gene or protein names in natural language sentences. We approach this ...
BMCBI
2005
13 years 4 months ago
2005
Background: Clustering the ESTs from a large dataset representing a single species is a convenient starting point for a number of investigations into gene discovery, genome evolut...
BMCBI
2005
13 years 4 months ago
2005
Background: There has been much evidence recently for a link between transcriptional regulation and chromosomal gene order, but the relationship between genomic organization, regu...