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ICCS
2009
Springer
9 years 2 months ago
Balancing Scientist Needs and Volunteer Preferences in Volunteer Computing Using Constraint Optimization
BOINC is a middleware for Volunteer Computing. In BOINC projects, heterogeneous resources distributed across the Internet are used for large-scale scientific simulations. The larg...
James Atlas, Trilce Estrada, Keith Decker, Michela...
ICCS
2009
Springer
9 years 2 months ago
Evaluation of Hierarchical Mesh Reorderings
Irregular and sparse scientific computing programs frequently experience performance losses due to inefficient use of the memory system in most machines. Previous work has shown t...
Michelle Mills Strout, Nissa Osheim, Dave Rostron,...
ICCS
2009
Springer
9 years 2 months ago
GPU Accelerated RNA Folding Algorithm
Many bioinformatics studies require the analysis of RNA or DNA structures. More specifically, extensive work is done to elaborate efficient algorithms able to predict the 2-D fold...
Guillaume Rizk, Dominique Lavenier
ICCS
2009
Springer
9 years 2 months ago
High Frequency Assessment from Multiresolution Analysis
We propose a method for the assessment and visualization of high frequency regions of a multiresolution image. We combine both orientation tensor and multiresolution analysis to gi...
Tássio Knop de Castro, Eder de Almeida Pere...
ICCS
2009
Springer
9 years 2 months ago
Hiding Communication Latency with Non-SPMD, Graph-Based Execution
Reformulating an algorithm to mask communication delays is crucial in maintaining scalability, but traditional solutions embed the overlap strategy into the application. We present...
Jacob Sorensen, Scott B. Baden
ICCS
2009
Springer
9 years 2 months ago
A Note on Auto-tuning GEMM for GPUs
The development of high performance dense linear algebra (DLA) critically depends on highly optimized BLAS, and especially on the matrix multiplication routine (GEMM). This is espe...
Yinan Li, Jack Dongarra, Stanimire Tomov
ICCS
2009
Springer
9 years 2 months ago
Parallel Algorithms for Dandelion-Like Codes
Saverio Caminiti, Rossella Petreschi
ICCS
2009
Springer
9 years 2 months ago
Simulating Individual-Based Models of Epidemics in Hierarchical Networks
Current mathematical modeling methods for the spreading of infectious diseases are too simplified and do not scale well. We present the Simulator of Epidemic Evolution in Complex ...
Rick Quax, David A. Bader, Peter M. A. Sloot
ICCS
2009
Springer
9 years 2 months ago
A Scalable Non-blocking Multicast Scheme for Distributed DAG Scheduling
Abstract. This paper presents an application-level non-blocking multicast scheme for dynamic DAG scheduling on large-scale distributedmemory systems. The multicast scheme takes int...
Fengguang Song, Jack Dongarra, Shirley Moore
ICCS
2009
Springer
9 years 2 months ago
Experience with Approximations in the Trust-Region Parallel Direct Search Algorithm
Recent years have seen growth in the number of algorithms designed to solve challenging simulation-based nonlinear optimization problems. One such algorithm is the Trust-Region Par...
S. M. Shontz, V. E. Howle, P. D. Hough
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