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IJBRA
2010
133views more  IJBRA 2010»
13 years 27 days ago
Scalable biomedical Named Entity Recognition: investigation of a database-supported SVM approach
This paper explores the scalability issues associated with solving the Named Entity Recognition (NER) problem using Support Vector Machines (SVM) and high-dimensional features and ...
Mona Soliman Habib, Jugal Kalita
IJBRA
2010
108views more  IJBRA 2010»
13 years 27 days ago
Assessing and improving the accuracy of detecting protein adaptation with the TreeSAAP analytical software
The TreeSAAP software has been successfully used in a variety of protein studies for identifying and characterizing adaptation in terms of shifts in the physicochemical properties ...
David A. McClellan, David D. Ellison
IJBRA
2010
121views more  IJBRA 2010»
13 years 2 months ago
Mining Cytochrome b561 proteins from plant genomes
—Cytochrome b561 (Cyt-b561) proteins play important functions in plants such as anti-toxin defense reactions, growth and development, and prevention of damage to plants from exce...
Stephen O. Opiyo, Etsuko N. Moriyama
IJBRA
2010
89views more  IJBRA 2010»
13 years 2 months ago
Strategies for enhanced annotation of a microarray probe set
—We aim to determine the biological relevance of genes identified through microarray-mediated transcriptional profiling of Xenopus sensory organs and brain tissue. Genetic data...
TuShun R. Powers, Selene M. Virk, Elba E. Serrano
IJBRA
2010
134views more  IJBRA 2010»
13 years 2 months ago
Deterministic graph-theoretic algorithm for detecting modules in biological interaction networks
—Accumulating evidence suggests that biological systems exhibit modular organization. Accurate identification of modularity is vital for understanding this organization. A recen...
Roger L. Chang, Feng Luo, Stuart Johnson, Richard ...
IJBRA
2010
116views more  IJBRA 2010»
13 years 2 months ago
Scaling alignment of large ontologies
: In recent years, the number of ontologies shared on the Web has increased dramatically, supporting a growing set of applications such as biological knowledge sharing, enhanced se...
Suzette Stoutenburg, Jugal Kalita, Kaily Ewing, Li...