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JCB
2008
73views more  JCB 2008»
13 years 4 months ago
Identifying Genes of Gene Regulatory Networks Using Formal Concept Analysis
Jutta Gebert, Susanne Motameny, Ulrich Faigle, Chr...
JCB
2008
106views more  JCB 2008»
13 years 4 months ago
Statistics of Random Protein Superpositions: p-Values for Pairwise Structure Alignment
Quantification of statistical significance is essential for the interpretation of protein structural similarity. To address this, a random model for protein structure comparison w...
James O. Wrabl, Nick V. Grishin
JCB
2008
46views more  JCB 2008»
13 years 4 months ago
Inferring Ancestral Gene Orders for a Family of Tandemly Arrayed Genes
Denis Bertrand, Mathieu Lajoie, Nadia El-Mabrouk
JCB
2008
52views more  JCB 2008»
13 years 4 months ago
Spectrum-Based De Novo Repeat Detection in Genomic Sequences
A novel approach to the detection of genomic repeats is presented in this paper. The technique, dubbed SAGRI (Spectrum Assisted Genomic Repeat Identifier), is based on the spectru...
Huy Hoang Do, Kwok Pui Choi, Franco P. Preparata, ...
JCB
2008
94views more  JCB 2008»
13 years 4 months ago
Prioritize and Select SNPs for Association Studies with Multi-Stage Designs
Large-scale whole genome association studies are increasingly common, due in large part to recent advances in genotyping technology. With this change in paradigm for genetic studi...
Jing Li
JCB
2008
71views more  JCB 2008»
13 years 4 months ago
Short Quartet Puzzling: A New Quartet-Based Phylogeny Reconstruction Algorithm
Quartet-based phylogeny reconstruction methods, such as Quartet Puzzling, were introduced in the hope that they might be competitive with maximum likelihood methods, without being...
Sagi Snir, Tandy Warnow, Satish Rao