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BMCBI
2006
94views more  BMCBI 2006»
13 years 4 months ago
Metabolite coupling in genome-scale metabolic networks
Background: Biochemically detailed stoichiometric matrices have now been reconstructed for various bacteria, yeast, and for the human cardiac mitochondrion based on genomic and pr...
Scott A. Becker, Nathan D. Price, Bernhard O. Pals...
BMCBI
2007
160views more  BMCBI 2007»
13 years 4 months ago
Optimization based automated curation of metabolic reconstructions
Background: Currently, there exists tens of different microbial and eukaryotic metabolic reconstructions (e.g., Escherichia coli, Saccharomyces cerevisiae, Bacillus subtilis) with...
Vinay Satish Kumar, Madhukar S. Dasika, Costas D. ...
BMCBI
2008
109views more  BMCBI 2008»
13 years 4 months ago
MetaFIND: A feature analysis tool for metabolomics data
Background: Metabolomics, or metabonomics, refers to the quantitative analysis of all metabolites present within a biological sample and is generally carried out using NMR spectro...
Kenneth Bryan, Lorraine Brennan, Padraig Cunningha...
ALMOB
2008
112views more  ALMOB 2008»
13 years 4 months ago
Metabolite-based clustering and visualization of mass spectrometry data using one-dimensional self-organizing maps
Background: One of the goals of global metabolomic analysis is to identify metabolic markers that are hidden within a large background of data originating from high-throughput ana...
Peter Meinicke, Thomas Lingner, Alexander Kaever, ...
BILDMED
2006
163views Algorithms» more  BILDMED 2006»
13 years 6 months ago
CLARET: A Tool for Fully Automated Evaluation of MRSI with Pattern Recognition Methods
Abstract. Magnetic Resonance Spectroscopic Imaging (MRSI) measures relative concentrations of metabolites in vivo and can thus be used for the diagnosis of certain tumors. We intro...
B. Michael Kelm, Bjoern H. Menze, T. Neff, Christi...