BMCBI
2011
12 years 11 months ago
2011
Background: The PathOlogist is a new tool designed to transform large sets of gene expression data into quantitative descriptors of pathway-level behavior. The tool aims to provid...
SCFBM
2008
13 years 4 months ago
2008
Background: We present a C++ class library for Monte Carlo simulation of molecular systems, including proteins in solution. The design is generic and highly modular, enabling mult...
JCC
2002
13 years 4 months ago
2002
: A new method for the characterization of molecules based on the model approach of molecular surfaces is presented. We use the topographical properties of the surface as well as t...
BMCBI
2004
13 years 4 months ago
2004
Background: A central challenge in the molecular diagnosis and treatment of cancer is to define a set of molecular features that, taken together, distinguish a given cancer, or ty...
BMCBI
2005
13 years 4 months ago
2005
Background: Genome wide microarray studies have the potential to unveil novel disease entities. Clinically homogeneous groups of patients can have diverse gene expression profiles...
IWC
2006
13 years 4 months ago
2006
This paper presents an overview of auditory display (the use of non-speech sounds to convey information) applied to the study of molecular properties in human
CCE
2006
13 years 4 months ago
2006
This paper describes applications of molecular simulation to microelectronics processes and the subsequent development of techniques for multiscale simulation and multiscale syste...
CORR
2010
Springer
13 years 4 months ago
2010
Springer
Molecular codes translate information written in one type of molecule into another molecular language. We introduce a simple model that treats molecular codes as noisy information...
CORR
2010
Springer
13 years 4 months ago
2010
Springer
tigate the role of nondeterminism in Winfree's abstract Tile Assembly Model (aTAM), which was conceived to model artificial molecular self-assembling systems constructed from...
CGF
2010
13 years 4 months ago
2010
Molecular dynamics simulations are a principal tool for studying molecular systems. Such simulations are used to investigate molecular structure, dynamics, and thermodynamical pro...