Sciweavers

NAR
2011
186views Computer Vision» more  NAR 2011»
12 years 6 months ago
TcoF-DB: dragon database for human transcription co-factors and transcription factor interacting proteins
The initiation and regulation of transcription in eukaryotes is complex and involves a large number of transcription factors (TFs), which are known to bind to the regulatory regio...
Ulf Schaefer, Sebastian Schmeier, Vladimir B. Baji...
NAR
2011
208views Computer Vision» more  NAR 2011»
12 years 6 months ago
CaSNP: a database for interrogating copy number alterations of cancer genome from SNP array data
Cancer is known to have abundant copy number alterations (CNAs) that greatly contribute to its pathogenesis and progression. Investigation of CNA regions could potentially help id...
Qingyi Cao, Meng Zhou, Xujun Wang, Clifford A. Mey...
NAR
2011
172views Computer Vision» more  NAR 2011»
12 years 6 months ago
NGSmethDB: a database for next-generation sequencing single-cytosine-resolution DNA methylation data
Next-generation sequencing (NGS) together with bisulphite conversion allows the generation of whole genome methylation maps at single-cytosine resolution. This allows studying the...
Michael Hackenberg, Guillermo Barturen, José...
NAR
2011
216views Computer Vision» more  NAR 2011»
12 years 6 months ago
dbDNV: a resource of duplicated gene nucleotide variants in human genome
Gene duplications are scattered widely throughout the human genome. A single-base difference located in nearly identical duplicated segments may be misjudged as a single nucleotid...
Meng-Ru Ho, Kuo-Wang Tsai, Chun-houh Chen, Wen-cha...
NAR
2011
227views Computer Vision» more  NAR 2011»
12 years 6 months ago
CADgene: a comprehensive database for coronary artery disease genes
Coronary artery disease (CAD) is a complex, multifactorial disease and a leading cause of mortality world wide. Over the past decades, great efforts have been made to elucidate th...
Hui Liu, Wei Liu, Yifang Liao, Long Cheng, Qian Li...
NAR
2011
199views Computer Vision» more  NAR 2011»
12 years 6 months ago
FragmentStore - a comprehensive database of fragments linking metabolites, toxic molecules and drugs
Consideration of biomolecules in terms of their molecular building blocks provides valuable new information regarding their synthesis, degradation and similarity. Here, we present...
Jessica Ahmed, Catherine L. Worth, Paul Florian Th...
NAR
2011
205views Computer Vision» more  NAR 2011»
12 years 6 months ago
The BRENDA Tissue Ontology (BTO): the first all-integrating ontology of all organisms for enzyme sources
BTO, the BRENDA Tissue Ontology (http://www .BTO.brenda-enzymes.org) represents a comprehensive structured encyclopedia of tissue terms. The project started in 2003 to create a co...
Marion Gremse, Antje Chang, Ida Schomburg, Andreas...
NAR
2011
208views Computer Vision» more  NAR 2011»
12 years 6 months ago
The UCSC Genome Browser database: update 2011
The University of California, Santa Cruz Genome Browser (http://genome.ucsc.edu) offers online access to a database of genomic sequence and annotation data for a wide variety of o...
Pauline A. Fujita, Brooke L. Rhead, Ann S. Zweig, ...
NAR
2011
197views Computer Vision» more  NAR 2011»
12 years 6 months ago
dictyBase update 2011: web 2.0 functionality and the initial steps towards a genome portal for the Amoebozoa
dictyBase (http://www.dictybase.org), the model organism database for Dictyostelium, aims to provide the broad biomedical research community with well integrated, high quality dat...
Pascale Gaudet, Petra Fey, Siddhartha Basu, Yulia ...
NAR
2011
188views Computer Vision» more  NAR 2011»
12 years 6 months ago
NCBI Epigenomics: a new public resource for exploring epigenomic data sets
The Epigenomics database at the National Center for Biotechnology Information (NCBI) is a new resource that has been created to serve as a comprehensive public resource for whole-...
Ian M. Fingerman, Lee McDaniel, Xuan Zhang, Walter...