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142views more  TITB 2002»
10 years 11 months ago
Building a bioinformatics ontology using OIL
This paper describes the initial stages of building an ontology of bioinformatics and molecular biology. The conceptualisation is encoded using the Ontology Inference Layer (OIL),...
Robert Stevens, Carole A. Goble, Ian Horrocks, Sea...
188views more  SOSYM 2002»
10 years 11 months ago
Extending the Unified Modeling Language for ontology development
Abstract. There is rapidly growing momentum for web enabled agents that reason about and dynamically integrate the appropriate knowledge and services at run-time. The dynamic integ...
Kenneth Baclawski, Mieczyslaw M. Kokar, Paul A. Ko...
107views more  DEBU 2002»
10 years 11 months ago
Exploiting Web Service Semantics: Taxonomies vs. Ontologies
Comprehensive semantic descriptions of Web services are essential to exploit them in their full potential, that is, discovering them dynamically, and enabling automated service ne...
Asuman Dogac, Gokce Laleci, Yildiray Kabak, Ibrahi...
87views Education» more  CORR 2002»
10 years 11 months ago
Rerendering Semantic Ontologies: Automatic Extensions to UMLS through Corpus Analytics
In this paper, we discuss the utility and deficiencies of existing ontology resources for a number of language processing applications. We describe a technique for increasing the ...
James Pustejovsky, Anna Rumshisky, José M. ...
10 years 11 months ago
SOAT: A Semi-Automatic Domain Ontology Acquisition Tool from Chinese Corpus
In this paper, we focus on the domain ontology acquisition from Chinese corpus by extracting rules designed for Chinese phrases. These rules are noun sequences with part-of-speech...
Shih-Hung Wu, Wen-Lian Hsu
117views more  BIB 2000»
10 years 11 months ago
Ontology-based Knowledge Representation for Bioinformatics
Much of biology works by applying prior knowledge (`what is known') to an unknown entity, rather than the application of a set of axioms that will elicit knowledge. In additi...
Robert Stevens, Carole A. Goble, Sean Bechhofer
142views more  IJMMS 2007»
10 years 11 months ago
Using OWL to model biological knowledge
Much has been written of the facilities for ontology building and reasoning offered for ontologies expressed in the Web Ontology Language (OWL). Less has been written about how th...
Robert Stevens, Mikel Egaña Aranguren, Katy...
93views more  IJIS 2007»
10 years 11 months ago
Perspectives on ontology-based querying
In this paper, we introduce principles for ontology-based querying of information bases. We consider a framework in which a basis ontology over atomic concepts in combination with ...
Rasmus Knappe, Henrik Bulskov, Troels Andreasen
175views more  NAR 2008»
10 years 11 months ago
Onto-CC: a web server for identifying Gene Ontology conceptual clusters
The Gene Ontology (GO) vocabulary has been extensively explored to analyze the functions of coexpressed genes. However, despite its extended use in Biology and Medical Sciences, t...
Rocío Romero-Záliz, Coral del Val, J...
102views more  ESWA 2007»
10 years 11 months ago
Elicitation synergy of extracting conceptual tags and hierarchies in textual document
This study develops an ontology building process for extracting conceptual tags and hierarchies in textual corpus. Though humans have been creating ontologies for many years, effi...
Yu-Liang Chi