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    BMCBI
    2007
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    160-fold acceleration of the Smith-Waterman algorithm using a field programmable gate array (FPGA)
    13 years 5 months ago
    160-fold acceleration of the Smith-Waterman algorithm using a field programmable gate array (FPGA)
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    Background: To infer homology and subsequently gene function, the Smith-Waterman (SW) algorithm is used to find the optimal local alignment between two sequences. When searching s...
    Isaac T. S. Li, Warren Shum, Kevin Truong
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