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    NAR
    2011
    225views Computer Vision» more  NAR 2011»
    IsoBase: a database of functionally related proteins across PPI networks
    12 years 8 months ago
    IsoBase: a database of functionally related proteins across PPI networks
    Download  nar.oxfordjournals.org
    We describe IsoBase, a database identifying functionally related proteins, across five major eukaryotic model organisms: Saccharomyces cerevisiae, Drosophila melanogaster, Caenorh...
    Daniel Park, Rohit Singh, Michael Baym, Chung-Shou...
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    NAR
    2011
    223views Computer Vision» more  NAR 2011»
    KUPS: constructing datasets of interacting and non-interacting protein pairs with associated attributions
    12 years 8 months ago
    KUPS: constructing datasets of interacting and non-interacting protein pairs with associated attributions
    Download  nar.oxfordjournals.org
    KUPS (The University of Kansas Proteomics Service) provides high-quality protein–protein interaction (PPI) data for researchers developing and evaluating computational models fo...
    Xue-wen Chen, Jong Cheol Jeong, Patrick Dermyer
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    BMCBI
    2011
    215views Artificial Intelligence» more  BMCBI 2011»
    Assessing the functional coherence of modules found in multiple-evidence networks from Arabidopsis
    12 years 8 months ago
    Assessing the functional coherence of modules found in multiple-evidence networks from Arabidopsis
    Download  www.biomedcentral.com
    Background: Combining multiple evidence-types from different information sources has the potential to reveal new relationships in biological systems. The integrated information ca...
    Artem Lysenko, Michael Defoin-Platel, Keywan Hassa...
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    BMCBI
    2011
    186views Artificial Intelligence» more  BMCBI 2011»
    Dr. PIAS: an integrative system for assessing the druggability of protein-protein interactions
    13 years 1 days ago
    Dr. PIAS: an integrative system for assessing the druggability of protein-protein interactions
    Download  www.biomedcentral.com
    Background: The amount of data on protein-protein interactions (PPIs) available in public databases and in the literature has rapidly expanded in recent years. PPI data can provid...
    Nobuyoshi Sugaya, Toshio Furuya
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    BMCBI
    2008
    134views more  BMCBI 2008»
    Identification of transcription factor contexts in literature using machine learning approaches
    13 years 5 months ago
    Identification of transcription factor contexts in literature using machine learning approaches
    Download  www.biomedcentral.com
    Background: Availability of information about transcription factors (TFs) is crucial for genome biology, as TFs play a central role in the regulation of gene expression. While man...
    Hui Yang, Goran Nenadic, John A. Keane
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