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RECOMB
2000
Springer
10 years 7 months ago
Early eukaryote evolution based on mitochondrial gene order breakpoints
We present a general heuristicfor the median problem for induced breakpoints on genomes with unequal gene content and incorporate this into a routine for estimating optimal gene o...
David Sankoff, David Bryant, Mélanie Deneau...
RECOMB
2000
Springer
10 years 7 months ago
Sequencing-by-hybridization at the information-theory bound: an optimal algorithm
In a recent paper (Preparata et al., 1999) we introduced a novel probing scheme for DNA sequencing by hybridization (SBH). The new gapped-probe scheme combines natural and univers...
Franco P. Preparata, Eli Upfal
RECOMB
2000
Springer
10 years 7 months ago
Mutation-tolerant protein identification by mass-spectrometry
Pavel A. Pevzner, Vlado Dancík, Chris L. Ta...
RECOMB
2000
Springer
10 years 7 months ago
Using Bayesian networks to analyze expression data
DNA hybridization arrays simultaneously measure the expression level for thousands of genes. These measurements provide a "snapshot" of transcription levels within the c...
Nir Friedman, Michal Linial, Iftach Nachman, Dana ...
RECOMB
2000
Springer
10 years 7 months ago
Contig selection in physical mapping
In physical mapping, one orders a set of genetic landmarks or a library of cloned fragments of DNA according to their position in the genome. Our approach to physical mapping divi...
Steffen Heber, Jens Stoye, Jörg D. Hoheisel, ...
RECOMB
2000
Springer
10 years 7 months ago
Multiple maxima of likelihood in phylogenetic trees: an analytic approach
Benny Chor, Michael D. Hendy, Barbara R. Holland, ...
RECOMB
2000
Springer
10 years 7 months ago
Universal DNA tag systems: a combinatorial design scheme
Custom-designed DNA arrays offer the possibility of simultaneously monitoring thousands of hybridization reactions. These arrays show great potential for many medical and scientif...
Amir Ben-Dor, Richard M. Karp, Benno Schwikowski, ...
RECOMB
2000
Springer
10 years 7 months ago
A compression algorithm for DNA sequences and its applications in genome comparison
We present a lossless compression algorithm, GenCompress, for genetic sequences, based on searching for approximate repeats. Our algorithm achieves the best compression ratios for...
Xin Chen, Sam Kwong, Ming Li
RECOMB
2000
Springer
10 years 7 months ago
Human and mouse gene structure: comparative analysis and application to exon prediction
Serafim Batzoglou, Lior Pachter, Jill P. Mesirov, ...
RECOMB
2000
Springer
10 years 7 months ago
Notung: dating gene duplications using gene family trees
Kevin Chen, Dannie Durand, Martin Farach-Colton
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